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cuda

Mentors and Regional Facilitators
Name Region Skills Interests
Andrew Sherman ACCESS CSSN, Campus Champions, CAREERS
Michael Blackmon Campus Champions, ACCESS CSSN
Chris Carothers CAREERS
Christopher Bl… Campus Champions
Cody Stevens Campus Champions, CCMNet
Daniel Howard ACCESS CSSN, Campus Champions, CCMNet, RMACC
Edwin Posada Campus Champions
Fan Chen ACCESS CSSN
Gaurav Khanna Campus Champions, CAREERS, Northeast, CCMNet
Gil Speyer ACCESS CSSN, RMACC, Campus Champions
Yu-Chieh Chi Campus Champions
Jason Wells ACCESS CSSN, Campus Champions
Katia Bulekova ACCESS CSSN, Campus Champions, CAREERS, CCMNet, Northeast
Kenneth Bundy CAREERS
Lonnie Crosby Campus Champions, ACCESS CSSN
Mohsen Ahmadkhani CCMNet, ACCESS CSSN
Michael Puerrer Campus Champions, Northeast
David Reddy Campus Champions
Ron Rahaman Campus Champions
Grant Scott Great Plains
Xiaoqin Huang ACCESS CSSN
Shaohao Chen Northeast
Swabir Silayi ACCESS CSSN, CCMNet, Campus Champions
Shawn Sivy Campus Champions, CAREERS
Tyler Burkett Kentucky

Affinity Groups

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Engagements

GPU-accelerated Ice Sheet Flow Modeling
University of North Dakota

Sea levels are rising (3.7 mm/year and increasing!)! The primary contributor to rising sea levels is enhanced polar ice discharge due to climate change. However, their dynamic response to climate change remains a fundamental uncertainty in future projections. Computational cost limits the simulation time on which models can run to narrow the uncertainty in future sea level rise predictions. The project's overarching goal is to leverage GPU hardware capabilities to significantly alleviate the computational cost and narrow the uncertainty in future sea level rise predictions. Solving time-independent stress balance equations to predict ice velocity or flow is the most computationally expensive part of ice-sheet simulations in terms of computer memory and execution time. The PI developed a preliminary ice-sheet flow GPU implementation for real-world glaciers. This project aims to investigate the GPU implementation further, identify bottlenecks and implement changes to justify it in the price to performance metrics to a "standard" CPU implementation. In addition, develop a performance portable hardware (or architecture) agnostic implementation.

Status: Complete
Bayesian nonparametric ensemble air quality model predictions at high spatio-temporal daily nationwide  1 km grid cell
Columbia University

I aim to run a Bayesian Nonparametric Ensemble (BNE) machine learning model implemented in MATLAB. Previously, I successfully tested the model on Columbia's HPC GPU cluster using SLURM. I have since enabled MATLAB parallel computing and enhanced my script with additional lines of code for optimized execution. 

I want to leverage ACCESS Accelerate allocations to run this model at scale.

The BNE framework is an innovative ensemble modeling approach designed for high-resolution air pollution exposure prediction and spatiotemporal uncertainty characterization. This work requires significant computational resources due to the complexity and scale of the task. Specifically, the model predicts daily air pollutant concentrations (PM2.5​ and NO2 at a 1 km grid resolution across the United States, spanning the years 2010–2018. Each daily prediction dataset is approximately 6 GB in size, resulting in substantial storage and processing demands.

To ensure efficient training, validation, and execution of the ensemble models at a national scale, I need access to GPU clusters with the following resources:

  • Permanent storage: ≥100 TB
  • Temporary storage: ≥50 TB
  • RAM: ≥725 GB

In addition to MATLAB, I also require Python and R installed on the system. I use Python notebooks to analyze output data and run R packages through a conda environment in Jupyter Notebook. These tools are essential for post-processing and visualization of model predictions, as well as for running complementary statistical analyses.

To finalize the GPU system configuration based on my requirements and initial runs, I would appreciate guidance from an expert. Since I already have approval for the ACCESS Accelerate allocation, this support will help ensure a smooth setup and efficient utilization of the allocated resources.

Status: Complete

People with Expertise

Daniel Howard

University Corporation for Atmospheric Research

Programs

ACCESS CSSN, Campus Champions, CCMNet, RMACC

Roles

mentor, research computing facilitator, research software engineer, CCMNet

Daniel Howard headshot

Expertise

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Xiaoqin Huang

Rice University

Programs

ACCESS CSSN

Roles

mentor, research computing facilitator, research software engineer, cssn

xqhuang at Rice

Expertise

Mohsen Ahmadkhani

Programs

CCMNet, ACCESS CSSN

Roles

student-facilitator, mentor, cssn, CCMNet

Mohsen Ahmadkhani

Expertise

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People with Interest

Andrew Fullard

University of Denver

Programs

Campus Champions

Roles

mentor, researcher/educator, research computing facilitator, research software engineer

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Interests

Devin Bayly

University of Arizona

Programs

ACCESS CSSN, Campus Champions, CCMNet

Roles

research computing facilitator, Affinity Group Leader, CCMNet

User

Interests

David Warden

SUNY Geneseo

Programs

Campus Champions, CCMNet, ACCESS CSSN

Roles

research computing facilitator, cssn, CCMNet

black and white analog photo print portrait of David Warden in a darkroom processing tray

Interests